The detailed information of tRNA gene sequence


Sequence ID>SRA1000660
Genome IDSRR001046.15501
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 84
End posion on genome 8
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ccagagaaat
tRNA gene sequence 
GCGTCCGTAGCTCAGCTGGTTAGAGTATCGCCTTGACATGGCGGGGGTCGGTGGTTCGAG
TCCACTCGGACGCACCA
Downstream region at tRNA end position 
ttctgaannn
Secondary structure (Cloverleaf model)
>SRA1000660	Val	GAC
                   t      ACCA ttctgaannn
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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