The detailed information of tRNA gene sequence


Sequence ID>SRA1000664
Genome IDSRR001046.18676
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 32
End posion on genome 106
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaacagttt
tRNA gene sequence 
GGCCCGTTCGTCTAGGGGTTAGGACGCAGGATTTTCATTCCTGAAACACGGGTTCGATTC
CCGTACGGGCTGCCA
Downstream region at tRNA end position 
aatttctagn
Secondary structure (Cloverleaf model)
>SRA1000664	Glu	TTC
                   t      GCCA aatttctagn
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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