The detailed information of tRNA gene sequence


Sequence ID>SRA1000667
Genome IDSRR001046.32673
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 78
End posion on genome 2
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gcccctcagt
tRNA gene sequence 
GCCGACATAGCTCAGTAGGTTAGAGCGCTTGATTGTGGATCAAGAGGTCCCCCGTTCGAG
CCGGGGTGTCGGTACCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000667	His	GTG
                   t      ACCA tnnnnnnnnn
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          C G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    A       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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