The detailed information of tRNA gene sequence


Sequence ID>SRA1000671
Genome IDSRR001046.39539
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 12
End posion on genome 85
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctgccttgat
tRNA gene sequence 
GATCCCGTGGTCCAATGGCGAAGGCGCCTGCGTGACGTGCAGGAAACTGCTGGTTCGATT
CCAGCCGGGATCACtg
Downstream region at tRNA end position 
aaacaacggt
Secondary structure (Cloverleaf model)
>SRA1000671	Val	GAC
                   t      ACtg aaacaacggt
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C G A C C     A
      T A A        G      | | | | |     G
    G       C C T G       G C T G G     C
    G         | + |                 T T
    C       A G G C
      G A          G     AAACT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  G       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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