The detailed information of tRNA gene sequence


Sequence ID>SRA1000675
Genome IDSRR001046.52062
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 107
End posion on genome 32
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnttat
tRNA gene sequence 
GGAGGATTAGCTCAGCTGGGANAGCACCTGCCTTACAAGCAGGGGGTCGGCGGTTCGATC
CCGTCATCCTCCACCA
Downstream region at tRNA end position 
tagttttttc
Secondary structure (Cloverleaf model)
>SRA1000675	Val	TAC
                   t      ACCA tagttttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G         | | |                 T T
    G       N A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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