The detailed information of tRNA gene sequence


Sequence ID>SRA1000682
Genome IDSRR001046.67564
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 19
End posion on genome 94
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaccatcac
tRNA gene sequence 
GGACCTGTGGAGCAGTTTGGAGTGCTCGCCACCCTGTCAAGGTGGAGGTCGCGGGTTCAA
ATCCCGTCAGGTCCGCtc
Downstream region at tRNA end position 
acggtcaggn
Secondary structure (Cloverleaf model)
>SRA1000682	Asp	GTC
                   c      GCtc acggtcaggn
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
    T T G A        G      + | | | |     A
  T         C G A G       G C G G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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