The detailed information of tRNA gene sequence


Sequence ID>SRA1000687
Genome IDSRR001046.79440
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 19
End posion on genome 94
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gacgggctcT
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGTGGGTTCAAA
TCCCGCCACCCCCNAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000687	Pro	CGG
                   T      NAnn nnnnnnnnnn
                     C   C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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