The detailed information of tRNA gene sequence


Sequence ID>SRA1000692
Genome IDSRR001046.94499
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 19
End posion on genome 103
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atacaaattt
tRNA gene sequence 
GCGGAAGTGGCGGAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCAAGGTGTGAG
AGTTCAAGTCTCTCCTTCCGCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000692	Leu	TAG
                   t      ACCA nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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