The detailed information of tRNA gene sequence


Sequence ID>SRA1000697
Genome IDSRR001046.103165
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 15
End posion on genome 89
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cccgtcccgt
tRNA gene sequence 
GCCCGGGTAGCTCAGGGGTAGAGCAGTGGATTGAAAATCCTCGTGTCGGTGGTTCGATTC
CGCCCCCGGGCACCA
Downstream region at tRNA end position 
ctcccttcgc
Secondary structure (Cloverleaf model)
>SRA1000697	Phe	GAA
                   t      ACCA ctcccttcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     C C G C C     A
        G A        A      | | + | |     G
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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