The detailed information of tRNA gene sequence


Sequence ID>SRA1000699
Genome IDSRR001046.106365
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 7
End posion on genome 82
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnncttctg
tRNA gene sequence 
GGGCCTATAGCTCAGCCTGGTTAGAGCGCTTCCCTGATAAGGAAGAGGCCGATGGTTCAA
GTCCATCTAGGCCCACtt
Downstream region at tRNA end position 
cgcacgcccg
Secondary structure (Cloverleaf model)
>SRA1000699	Ile	GAT
                   g      ACtt cgcacgcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C T A C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G A T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK