The detailed information of tRNA gene sequence


Sequence ID>SRA1000700
Genome IDSRR001046.109997
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 76
End posion on genome 1
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctcgctctt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGTGAGTTCGAA
TCCCACCGTCCCGACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000700	Pro	GGG
                   t      ACCn nnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G T G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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