The detailed information of tRNA gene sequence


Sequence ID>SRA1000702
Genome IDSRR001046.115810
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 84
End posion on genome 9
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacccgtgca
tRNA gene sequence 
GGGCGGGTAGCTCAGCCTGGCAGAGCAAGCGGCTCATAATCGCTGTGTCGCGGGTTCAAG
TCCCGCCCCGCTACCAc
Downstream region at tRNA end position 
cgacggcnnn
Secondary structure (Cloverleaf model)
>SRA1000702	Met	CAT
                   a      CCAc cgacggcnnn
                     G   A
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GTGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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