The detailed information of tRNA gene sequence


Sequence ID>SRA1000709
Genome IDSRR001046.148067
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tccctgtagc
tRNA gene sequence 
GCGCCCTTAGCTCAGCTGGATAGAGCACGTCCCTTCTAAGGATGTGGTCATTGGTTCGAA
TCCAATAGGGCGTGCCA
Downstream region at tRNA end position 
tttattcaaa
Secondary structure (Cloverleaf model)
>SRA1000709	Arg	TCT
                   c      GCCA tttattcaaa
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T A A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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