The detailed information of tRNA gene sequence


Sequence ID>SRA1000711
Genome IDSRR001046.160469
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 36
End posion on genome 111
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcgctttgct
tRNA gene sequence 
GTCCCGTTCGTCTAGCCAGGTCTAGGACACNGGGTTTTCATCCCAGCAACAGGGGTTCGA
ATCCCCTACGGGACGCtg
Downstream region at tRNA end position 
cccgcgctan
Secondary structure (Cloverleaf model)
>SRA1000711	Glu	TTC
                   t      GCtg cccgcgctan
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  A         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     CAAC
                    C - G
                    N   A
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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