The detailed information of tRNA gene sequence


Sequence ID>SRA1000713
Genome IDSRR001046.172051
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 73
End posion on genome -1
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actgaatttt
tRNA gene sequence 
GGCGGCGTGGCTCAGCTGGCTAGAGCGTACGGTTCATACCCGTGAGGTCGGGGGTTCGAC
TCCCTCCGCCGCTNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000713	Met	CAT
                   t      NNnn nnnnnnnnnn
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     C T C C C     A
      C G A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T + G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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