The detailed information of tRNA gene sequence


Sequence ID>SRA1000718
Genome IDSRR001046.180446
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 37
End posion on genome 109
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
cttcaggtta
tRNA gene sequence 
GCCGGTGTAGCTCAGGGGTAGAGCGTTTCCTTGGTAAGGAAGAGGCCACGGGTTCAAATC
CCGTCATTGGCTCtg
Downstream region at tRNA end position 
aaacagacta
Secondary structure (Cloverleaf model)
>SRA1000718	Thr	GGT
                   a      TCtg aaacagacta
                     G - C
                     C - G
                     C - G
                     G + T
                     G + T
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      G     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGCC
                    T + G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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