The detailed information of tRNA gene sequence


Sequence ID>SRA1000721
Genome IDSRR001046.183457
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 118
End posion on genome 32
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnggggc
tRNA gene sequence 
GGTACCGTGTCCGAGCGGCCTAAGGTGCAACTCTCGAAAAGTTGTGTGGTTAACGCCCAC
CGTGGGTTCAAATCCCACCGGTACCGCgc
Downstream region at tRNA end position 
cggtcgggat
Secondary structure (Cloverleaf model)
>SRA1000721	Ser	CGA
                   c      GCgc cggtcgggat
                     G - C
                     G - C
                     T - A
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G T G G G     C
    G         | |                   T T
    C       A G G T
      C T A        G     TGTGGTTAACGCCCACC
                    C - G
                    A - T
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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