The detailed information of tRNA gene sequence


Sequence ID>SRA1000722
Genome IDSRR001046.184435
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 8
End posion on genome 82
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnngctgttc
tRNA gene sequence 
GGCCAGGTAGCTCAGTTGGTACGAGCGTCCGACTGAAAATCGGAAGGTCGGCGGTTCGAC
CCCGCCCCTGGCCACag
Downstream region at tRNA end position 
aacccctcac
Secondary structure (Cloverleaf model)
>SRA1000722	Phe	GAA
                   c      ACag aacccctcac
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          C C
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A C        G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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