The detailed information of tRNA gene sequence


Sequence ID>SRA1000723
Genome IDSRR001046.184924
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 74
End posion on genome -1
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nngggccgcG
tRNA gene sequence 
GTGGGTGTAGCTCAGCTGGTAGAGCGCCGCGTTGTGGTCGCGGATGCCGCGGGTTCAAGT
CCCGTCACTCACCNNn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000723	His	GTG
                   G      CNNn nnnnnnnnnn
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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