The detailed information of tRNA gene sequence


Sequence ID>SRA1000731
Genome IDSRR001046.217971
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 79
End posion on genome 3
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnnng
tRNA gene sequence 
GGGCCCATAGCTCAACTGGATAGAGCAGCCGACTTCTAATCGGCAGGTTGAGGGTTCGAG
TCCTTCTGGGCCCGCCA
Downstream region at tRNA end position 
tannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000731	Arg	TCT
                   g      GCCA tannnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C T T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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