The detailed information of tRNA gene sequence


Sequence ID>SRA1000733
Genome IDSRR001046.221020
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 17
End posion on genome 92
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgctcggcac
tRNA gene sequence 
GGCCCCGTTGTGTAGCGGCCTAGCACGCCGCCCTCTCAAGGCGGTAGCGCGGGTTCGAAT
CCCGTCGGGGCTACGA
Downstream region at tRNA end position 
gtgaggcnnn
Secondary structure (Cloverleaf model)
>SRA1000733	Glu	CTC
                   c      ACGA gtgaggcnnn
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        T      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | | |                 T T
    C       G C A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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