The detailed information of tRNA gene sequence


Sequence ID>SRA1000739
Genome IDSRR001046.242320
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 92
End posion on genome 17
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cctgcaccat
tRNA gene sequence 
TCCTCGGTAGCTCAATTGGCAGAGCATTCGGCTGTTAACCGAAGGGTTCCTGGTTCGAGT
CCAGGCCGGGGAGCAA
Downstream region at tRNA end position 
aaggagcttg
Secondary structure (Cloverleaf model)
>SRA1000739	Asn	GTT
                   t      GCAA aaggagcttg
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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