The detailed information of tRNA gene sequence


Sequence ID>SRA1000740
Genome IDSRR001046.243571
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 97
End posion on genome 22
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position
acgacgaaat
tRNA gene sequence
GCCCGCGTAGCTCAGGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCACTGGTTCAAGT
CCAGTCGTGGGCACCA
Downstream region at tRNA end position
gatgagacgg
Secondary structure (Cloverleaf model)
>SRA1000740	Thr	GGT
                   t      ACCA gatgagacgg
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T G A C C     A
      G G A        A      | | | | |     A
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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