The detailed information of tRNA gene sequence


Sequence ID>SRA1000743
Genome IDSRR001046.244855
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 35
End posion on genome 108
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ancttcatag
tRNA gene sequence 
CCGGTAGTGGCGCAGCTTGGTAGCGCGCCTCGTTCGGGACGAGGAGGCCGCGAGTTCAAA
TCTCGCCTACCGGAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000743	Pro	CGG
                   g      Annn nnnnnnnnnn
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     A
    T       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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