Sequence ID | >SRA1000744 |
Genome ID | SRR001046.246448 |
Phylum/Class | Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) |
Species | |
Start position on genome
|
100
|
End posion on genome
|
25
|
Amino Acid
|
Trp
|
Anticodon
|
CCA
|
Upstream region at tRNA start position
|
nnnnncgcaa
|
tRNA gene sequence
|
AGGGCGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT CCTGTCCGCCCTGCGA
|
Downstream region at tRNA end position
|
cgaactgtca
|
Secondary structure (Cloverleaf model) | >SRA1000744 Trp CCA
a GCGA cgaactgtca
A - T
G - C
G - C
G - C
C - G
G - C
G - C T G
T T G T C C A
T A A G + | | | | G
T C T C G G C A G G C
G | | | | T T
G G A G C
T A A AGGTT
G - C
C - G
G - C
G - C
T - A
C A
T A
C C A
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [SRA] |