The detailed information of tRNA gene sequence


Sequence ID>SRA1000748
Genome IDSRR001046.252590
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 42
End posion on genome 116
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
ggttcaaccc
tRNA gene sequence 
TGGGGTATGGTGTAATTGGCAACACGGAGGTTTCTGGTACCTTTGTTCTTGGTTCGAGTC
CAGGTACCCCAGCAA
Downstream region at tRNA end position 
ggaaaaaann
Secondary structure (Cloverleaf model)
>SRA1000748	Gln	CTG
                   c      GCAA ggaaaaaann
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     G G A C C     A
      T A A        G      | + | | |     G
    T       T G T G       C T T G G     C
    G       | | | |                 T T
    G       A C A C
      C A          G     TGTT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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