The detailed information of tRNA gene sequence


Sequence ID>SRA1000755
Genome IDSRR001046.265489
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 92
End posion on genome 18
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actccacttc
tRNA gene sequence 
GGCGAGTTTGGCGGAGTGGTGACGCAGCGGATTGCAAATCCGTGTACACCGGTTCGATTC
CGGTACTCGCCTCCA
Downstream region at tRNA end position 
acaaaatcaa
Secondary structure (Cloverleaf model)
>SRA1000755	Cys	GCA
                   c      TCCA acaaaatcaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T G G C C     A
      G A G        T      | | | | |     G
    T       G C G G       A C C G G     C
    G             |                 T T
    G       A C G C
      T G          A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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