The detailed information of tRNA gene sequence


Sequence ID>SRA1000758
Genome IDSRR001046.282721
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)
Species
Start position on genome 98
End posion on genome 23
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gccagcttct
tRNA gene sequence 
GGCCCCATCGTTTAGCGGCCTAGGACGCCGCCCTTTCACGGCGGTAGCACGGGTTCGAAT
CCCGTTGGGGTCACTA
Downstream region at tRNA end position 
ggcgaatgag
Secondary structure (Cloverleaf model)
>SRA1000758	Glu	TTC
                   t      ACTA ggcgaatgag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T T T G       A C G G G     C
    G       + + | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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