The detailed information of tRNA gene sequence


Sequence ID>SRA1000760
Genome IDSRR001047.8169
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 105
End posion on genome 30
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtttanatgt
tRNA gene sequence 
ATCCCAGTAGCTCAATCGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGTAGGTTCAAGT
CCTACCTGCGATGCCA
Downstream region at tRNA end position 
aatttatatt
Secondary structure (Cloverleaf model)
>SRA1000760	Trp	CCA
                   t      GCCA aatttatatt
                     A - T
                     T - A
                     C - G
                     C   C
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     A
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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