The detailed information of tRNA gene sequence


Sequence ID>SRA1000766
Genome IDSRR001047.17505
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 88
End posion on genome 13
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gctaccatct
tRNA gene sequence 
GACCCAGTGGCCTAGTGGTTAGGGCACCTCACTTTCAATGAGGGGATCGTCGGTTCAAAT
CCGTCCTGGGTTACCA
Downstream region at tRNA end position 
atggaaagtg
Secondary structure (Cloverleaf model)
>SRA1000766	Glu	TTC
                   t      ACCA atggaaagtg
                     G + T
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T G C C     A
      T G A        G      |   | | |     A
    G       T C C G       G T C G G     C
    G       + | | |                 T T
    T       G G G C
      T A          A     GGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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