The detailed information of tRNA gene sequence


Sequence ID>SRA1000768
Genome IDSRR001047.20725
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 8
End posion on genome 83
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnngcatgat
tRNA gene sequence 
GCCCGGTTAGCTCAGCGGTAGAGCGGGAGGTTTACATCCTCCGTCAGCGGCGGTTCGATC
CCGTCACTGGGTACCA
Downstream region at tRNA end position 
attcacagga
Secondary structure (Cloverleaf model)
>SRA1000768	Val	TAC
                   t      ACCA attcacagga
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     T - A          C T
                    T     C T G C C     A
        G A        A      | + | | |     G
      C     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GTCAGC
                    G - C
                    G - C
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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