The detailed information of tRNA gene sequence


Sequence ID>SRA1000770
Genome IDSRR001047.21269
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 2
End posion on genome 77
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
CAGGGTATAGCGTAATGGTATCGCGCTTGGTTTGGGACCAAGAGATCTGTAGGTTCGAGT
CCTACTATCCTGACCA
Downstream region at tRNA end position 
tttatctact
Secondary structure (Cloverleaf model)
>SRA1000770	Pro	TGG
                   t      ACCA tttatctact
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T          T G
                    T     C A T C C     A
        A A        A      | | | | |     G
      T     T G C G       G T A G G     C
      G       | | |                 T T
      G     T C G C
        T A        G     AGATCT
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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