The detailed information of tRNA gene sequence


Sequence ID>SRA1000773
Genome IDSRR001047.31791
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 113
End posion on genome 37
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnctaa
tRNA gene sequence 
CGGGTAGTAGAGGAGTGGTTTATCTCGCTGGCTTTGGAAGCTAGAGCACGTGGGTTCGAA
TCCCGCCTACCCGACAA
Downstream region at tRNA end position 
agaatactct
Secondary structure (Cloverleaf model)
>SRA1000773	Pro	TGG
                   a      ACAA agaatactct
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | + | | |     G
    G       G G A G       G T G G G     C
    G       + | | |                 T T
    T       T C T C
      T T A        G     AGCAC
                    C - G
                    T - A
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK