The detailed information of tRNA gene sequence


Sequence ID>SRA1000776
Genome IDSRR001047.34832
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 10
End posion on genome 82
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nttttagaat
tRNA gene sequence 
TGGGGCGTATATTAATGGTAGATTTCCGGGCTCATAACCCGGCCGGTGTAGGTTCGATTC
CTGCCGCCCCGACag
Downstream region at tRNA end position 
agttttttat
Secondary structure (Cloverleaf model)
>SRA1000776	Met	CAT
                   t      ACag agttttttat
                     T + G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C G T C C     A
        A A        A      | + | | |     G
      T     T T A T       G T A G G     C
      G     + | |                   T T
      G     G A T T
        T A        T     CCGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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