The detailed information of tRNA gene sequence


Sequence ID>SRA1000778
Genome IDSRR001047.36160
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 87
End posion on genome 14
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nntgattgat
tRNA gene sequence 
GATGGGGTGCCCGAATGGTTAGGGAGCGGATTGCAAATCCGCCCATGTGAGTTCGATCCT
CACCCTCATCTCCA
Downstream region at tRNA end position 
tgctgactaa
Secondary structure (Cloverleaf model)
>SRA1000778	Cys	GCA
                   t      TCCA tgctgactaa
                     G - C
                     A - T
                     T - A
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     C A C T C     A
        A A        G      | | | | |     G
      T     G C C C       G T G A G     C
      G       | | |                 T T
      G     A G G G
        T T        A     CCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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