The detailed information of tRNA gene sequence


Sequence ID>SRA1000782
Genome IDSRR001047.44564
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 81
End posion on genome 5
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccactactac
tRNA gene sequence 
GGCCCTTTAGCTCAACAGGATAGAGCATCAGCTTTCTAATCTGAAGGTTAAAAGTTCGAA
TCTTTTAAGGGTCACAA
Downstream region at tRNA end position 
taaannnnnn
Secondary structure (Cloverleaf model)
>SRA1000782	Arg	TCT
                   c      ACAA taaannnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     T T T T C     A
      C A A        A      | | | | |     G
    A       C T C G       A A A A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    C   T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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