The detailed information of tRNA gene sequence


Sequence ID>SRA1000790
Genome IDSRR001047.65410
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 92
End posion on genome 8
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgtagttat
tRNA gene sequence 
GTGTTGGTGGCAGAGTGGTCGAATGCAACGGTCTGCAACACCGTTCCGAAAGGCGACGCC
GGTTCGAATCCGGCCCTACACTACA
Downstream region at tRNA end position 
aatagcannn
Secondary structure (Cloverleaf model)
>SRA1000790	Cys	GCA
                   t      TACA aatagcannn
                     G - C
                     T - A
                     G - C
                     T - A
                     T   T
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       G A C G       G C C G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     TCCGAAAGGCGAC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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