The detailed information of tRNA gene sequence


Sequence ID>SRA1000799
Genome IDSRR001047.96471
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 86
End posion on genome 10
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agaaatatag
tRNA gene sequence 
CGGTCAGTATATCAACTGGTTAGATTATCACGCTGATAACGTGAAGGTTACAGGTTCAAG
TCCTGTCTGACCGACAA
Downstream region at tRNA end position 
cataggcaan
Secondary structure (Cloverleaf model)
>SRA1000799	Ile	GAT
                   g      ACAA cataggcaan
                     C - G
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     T G T C C     A
      C A A        A      | | | | |     A
    T       C T A T       A C A G G     C
    G       | | |                   T T
    G       G A T T
      T T A        A     AGGTT
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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