The detailed information of tRNA gene sequence


Sequence ID>SRA1000802
Genome IDSRR001047.100423
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 89
End posion on genome 12
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tctcataaat
tRNA gene sequence 
GGACCAGTAGCTGAGTTGGTTTAGCGGGAGACTTTTAATCTCTGTCATACGTGAGTTCGA
TCCTCACCTGGTTCACCA
Downstream region at tRNA end position 
ttatttcgac
Secondary structure (Cloverleaf model)
>SRA1000802	Lys	TTT
                   t      ACCA ttatttcgac
                     G - C
                     G + T
                     A - T
                     C - G
                     C - G
                     A - T
                     G - C          C T
                    T     C A C T C     A
      T G A        A      | | | | |     G
    T       G T C G       G T G A G     C
    G       + | | |                 T T
    G       T A G C
      T T          G     GTCATAC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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