The detailed information of tRNA gene sequence


Sequence ID>SRA1000803
Genome IDSRR001047.105969
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 21
End posion on genome 95
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccttgttaat
tRNA gene sequence 
GGGAGAGTAGCCAAGAGGTAAGGCAAGAATTTCATAAGTTCTGCATCGCAGGTTCGAATC
CTGCCTCTCCCACCA
Downstream region at tRNA end position 
ctcaacgggg
Secondary structure (Cloverleaf model)
>SRA1000803	Met	CAT
                   t      ACCA ctcaacgggg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     G
      A     A C C G       G C A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GCATC
                    A - T
                    G - C
                    A - T
                    A - T
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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