The detailed information of tRNA gene sequence


Sequence ID>SRA1000811
Genome IDSRR001047.133443
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 8
End posion on genome 83
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnttacttt
tRNA gene sequence 
GCTTCTCTAGCCCAATGGCAGAGGCACTGGTCTTAGAAGCCAGATAGTGTAGGTTCAAGT
CCTACGAGAAGCACCA
Downstream region at tRNA end position 
ttgggctttt
Secondary structure (Cloverleaf model)
>SRA1000811	Leu	TAG
                   t      ACCA ttgggctttt
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     T - A
                     C - G          T G
                    T     C A T C C     A
      T A A        A      | | | | |     A
    G       C C C G       G T A G G     C
    G         | | |                 T T
    C       A G G C
      A G          A     ATAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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