The detailed information of tRNA gene sequence


Sequence ID>SRA1000812
Genome IDSRR001047.134779
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ggggcaccat
tRNA gene sequence 
CAGGGTGTAGCGCAGTAGGTAGCGCGACGGTCTTGGGCACCGTAGGTCGCAGGTTCGATC
CCTGTCACCCTGACCA
Downstream region at tRNA end position 
aatttnnnnn
Secondary structure (Cloverleaf model)
>SRA1000812	Pro	TGG
                   t      ACCA aatttnnnnn
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G T C C     A
      T G A        A      + | | | |     G
    A       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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