The detailed information of tRNA gene sequence


Sequence ID>SRA1000814
Genome IDSRR001047.137604
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 84
End posion on genome 10
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcctgtttat
tRNA gene sequence 
GCCTCGTTCGTATAGTGGTTATTACGCCGGATTGTCGATCCGAATACAAGAGTTCGATTC
TCTTACAAGGCGCCA
Downstream region at tRNA end position 
agttattgtn
Secondary structure (Cloverleaf model)
>SRA1000814	Asp	GTC
                   t      GCCA agttattgtn
                     G - C
                     C - G
                     C - G
                     T - A
                     C   A
                     G - C
                     T - A          T T
                    T     T T C T C     A
      T G A        C      | | | | |     G
    G       T A T G       A A G A G     C
    G         | | |                 T T
    T       T T A C
      T A          G     ATAC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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