The detailed information of tRNA gene sequence


Sequence ID>SRA1000817
Genome IDSRR001047.156674
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 81
End posion on genome 7
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctttataac
tRNA gene sequence 
GGTAGCGTAGCATAGTGGTTATGCTTCTCCTTCATACGGAGAATCACGTAGGTTCAATTC
CTACCGCTACTACCA
Downstream region at tRNA end position 
aattttnnnn
Secondary structure (Cloverleaf model)
>SRA1000817	Met	CAT
                   c      ACCA aattttnnnn
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     C A T C C     A
        G A        A      | | | | |     A
      T     T A C G       G T A G G     C
      G     | | | |                 T T
      G     A T G C
        T T        T     ATCAC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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