The detailed information of tRNA gene sequence


Sequence ID>SRA1000820
Genome IDSRR001047.171230
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 26
End posion on genome 101
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
cgagatttac
tRNA gene sequence 
GTGTGGATGGTGAGGCGGGTGCTCACACTGGCTTGAAACCCCAGAGACGAAGGTTCGAGT
CCTTCTCCACACACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1000820	Phe	GAA
                   c      ACCA nnnnnnnnnn
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T          T G
                    T     C T T C C     A
      C G G        G      | | | | |     G
    G       A G T G       G A A G G     C
    G       | | | |                 T T
    G       T C A C
      T G C        A     AGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C   C
                  T       C
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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