The detailed information of tRNA gene sequence


Sequence ID>SRA1000821
Genome IDSRR001047.173375
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 14
End posion on genome 89
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
acaataaatT
tRNA gene sequence 
GCCCTAGTAGTCGAATTGGCATAGACAATAGATTTAGGATCTATAATTTGATGGTTCGAA
TCCATTCTAGGGAATtt
Downstream region at tRNA end position 
nttaataagg
Secondary structure (Cloverleaf model)
>SRA1000821	Leu	TAG
                   T      ATtt nttaataagg
                     G   A
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C          T A
                    T     T T A C C     A
      T A A        A      + | | | |     G
    T       G C T G       G A T G G     C
    G         | | |                 T T
    G       A G A C
      C A T        A     AATTT
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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