The detailed information of tRNA gene sequence


Sequence ID>SRA1000831
Genome IDSRR001047.198088
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 102
End posion on genome 17
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggtggttatt
tRNA gene sequence 
GGATAGATGGGGGAGTGGTTAAACCCAACAGACTGTAAATCTGTCGCCTTACGGCTTCGT
AGGTTCAAATCCTACTCTGTCCACCA
Downstream region at tRNA end position 
atagtttata
Secondary structure (Cloverleaf model)
>SRA1000831	Tyr	GTA
                   t      ACCA atagtttata
                     G - C
                     G - C
                     A - T
                     T + G
                     A - T
                     G - C
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    G       G G G G       G T A G G     C
    G         | | |                 T T
    T       A C C C
      T A A        A     CGCCTTACGGCTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK