The detailed information of tRNA gene sequence


Sequence ID>SRA1000837
Genome IDSRR001047.225717
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 29
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctacaatc
tRNA gene sequence 
GGCCCCTTAGCTCAAAGGTAGAGCAGGCGACTCATAATCGCTTGGTTGCTGGTTCGAAAC
CAGTAGGGGCCACCA
Downstream region at tRNA end position 
cctttttatt
Secondary structure (Cloverleaf model)
>SRA1000837	Met	CAT
                   c      ACCA cctttttatt
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          A A
                    T     T G A C C     A
        A A        A      + | | | |     G
      A     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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