The detailed information of tRNA gene sequence


Sequence ID>SRA1000840
Genome IDSRR001047.228133
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 90
End posion on genome 15
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
actattaatt
tRNA gene sequence 
GTGAATATAGCTCAGTTGGTAGAGCATTAGACTGAAAATCTAAGTGTCATTGGTTCAATT
CCAATTATTCACACCA
Downstream region at tRNA end position 
ataaatccaa
Secondary structure (Cloverleaf model)
>SRA1000840	Phe	GAA
                   t      ACCA ataaatccaa
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     T - A
                     A - T          T T
                    T     T A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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