The detailed information of tRNA gene sequence


Sequence ID>SRA1000845
Genome IDSRR001047.255568
Search identical group
Phylum/ClassTilapia Farm, viral fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000139)
Species
Start position on genome 20
End posion on genome 95
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caaaaattaa
tRNA gene sequence 
CTAGGTTTGGGAAAGTTGGTAATCCGCATGGTTTGGGACCATGAGACCGCAAGTTCGAGC
CTTGCAACTTAGACGA
Downstream region at tRNA end position 
gaagagactg
Secondary structure (Cloverleaf model)
>SRA1000845	Pro	TGG
                   a      ACGA gaagagactg
                     C - G
                     T - A
                     A - T
                     G + T
                     G - C
                     T - A
                     T - A          C G
                    T     C G T T C     A
      T G A        G      | | | | |     G
    T       A A G G       G C A A G     C
    G         | | |                 T T
    G       A T C C
      T A          G     AGACC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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